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pyobjcryst 2.1.0 documentation
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Index – G
gamma (pyobjcryst.unitcell.UnitCell attribute)
GetAllEquivRefl() (pyobjcryst.spacegroup.SpaceGroup method)
GetAllSymmetrics() (pyobjcryst.spacegroup.SpaceGroup method)
GetAngle() (pyobjcryst.molecule.MolBondAngle method)
(pyobjcryst.molecule.MolDihedralAngle method)
GetAngle0() (pyobjcryst.molecule.MolBondAngle method)
(pyobjcryst.molecule.MolDihedralAngle method)
GetAngleDelta() (pyobjcryst.molecule.MolBondAngle method)
(pyobjcryst.molecule.MolDihedralAngle method)
GetAngleSigma() (pyobjcryst.molecule.MolBondAngle method)
(pyobjcryst.molecule.MolDihedralAngle method)
GetAsymUnit() (pyobjcryst.spacegroup.SpaceGroup method)
GetAtom() (pyobjcryst.molecule.Molecule method)
GetAtom1() (pyobjcryst.molecule.MolBond method)
(pyobjcryst.molecule.MolBondAngle method)
(pyobjcryst.molecule.MolDihedralAngle method)
GetAtom2() (pyobjcryst.molecule.MolBond method)
(pyobjcryst.molecule.MolBondAngle method)
(pyobjcryst.molecule.MolDihedralAngle method)
GetAtom3() (pyobjcryst.molecule.MolBondAngle method)
(pyobjcryst.molecule.MolDihedralAngle method)
GetAtom4() (pyobjcryst.molecule.MolDihedralAngle method)
GetAtomicNumber() (pyobjcryst.scatteringpower.ScatteringPowerAtom method)
GetAtomList() (pyobjcryst.molecule.Molecule method)
GetAtomPositionClock() (pyobjcryst.molecule.Molecule method)
GetAtoms() (pyobjcryst.molecule.StretchModeBondAngle method)
(pyobjcryst.molecule.StretchModeBondLength method)
(pyobjcryst.molecule.StretchModeTorsion method)
(pyobjcryst.molecule.StretchModeTwist method)
GetAttribute() (pyobjcryst.io.XMLCrystTag method)
GetAttributeName() (pyobjcryst.io.XMLCrystTag method)
GetAttributeValue() (pyobjcryst.io.XMLCrystTag method)
GetBij() (pyobjcryst.scatteringpower.ScatteringPower method)
GetBiso() (pyobjcryst.scatteringpower.ScatteringPower method)
GetBMatrix() (pyobjcryst.unitcell.UnitCell method)
GetBond() (pyobjcryst.molecule.Molecule method)
GetBondAngle() (in module pyobjcryst.molecule)
(pyobjcryst.molecule.Molecule method)
GetBondAngleList() (pyobjcryst.molecule.Molecule method)
GetBondLength() (in module pyobjcryst.molecule)
GetBondList() (pyobjcryst.molecule.Molecule method)
GetBondListClock() (pyobjcryst.molecule.Molecule method)
GetBondOrder() (pyobjcryst.molecule.MolBond method)
GetBondValenceCost() (pyobjcryst.crystal.Crystal method)
GetBondValenceRoList() (pyobjcryst.crystal.Crystal method)
GetBumpMergeCost() (pyobjcryst.crystal.Crystal method)
GetBumpMergeParList() (pyobjcryst.crystal.Crystal method)
GetCenterAtom() (pyobjcryst.molecule.Molecule method)
GetCenterAtomIndex() (pyobjcryst.zscatterer.ZScatterer method)
GetChi() (pyobjcryst.zscatterer.ZScatterer method)
GetChoice() (pyobjcryst.refinableobj.RefObjOpt method)
GetChoiceName() (pyobjcryst.refinableobj.RefObjOpt method)
GetClassName() (pyobjcryst.io.XMLCrystTag method)
(pyobjcryst.refinableobj.RefObjOpt method)
(pyobjcryst.refinableobj.RefinableObj method)
(pyobjcryst.zscatterer.ZAtom method)
(pyobjcryst.zscatterer.ZScatterer method)
GetClientRegistry() (pyobjcryst.refinableobj.RefinableObj method)
GetClock() (pyobjcryst.refinableobj.RefObjOpt method)
GetClockLatticePar() (pyobjcryst.unitcell.UnitCell method)
GetClockMaster() (pyobjcryst.refinableobj.RefinableObj method)
GetClockMetricMatrix() (pyobjcryst.unitcell.UnitCell method)
GetClockScattCompList() (pyobjcryst.crystal.Crystal method)
(pyobjcryst.scatterer.Scatterer method)
GetClockScatterer() (pyobjcryst.scatterer.Scatterer method)
GetClockScattererList() (pyobjcryst.crystal.Crystal method)
GetClockSpaceGroup() (pyobjcryst.spacegroup.SpaceGroup method)
GetComponentName() (pyobjcryst.scatterer.Scatterer method)
GetConjugate() (pyobjcryst.molecule.Quaternion method)
GetConnectivityTable() (pyobjcryst.molecule.Molecule method)
GetCrystal() (pyobjcryst.scatterer.Scatterer method)
GetDihedralAngle() (in module pyobjcryst.molecule)
(pyobjcryst.molecule.Molecule method)
GetDihedralAngleList() (pyobjcryst.molecule.Molecule method)
GetDynPopCorrIndex() (pyobjcryst.scatteringpower.ScatteringPower method)
GetElementName() (pyobjcryst.scatteringpower.ScatteringPowerAtom method)
GetExpectedIntensityFactor() (pyobjcryst.spacegroup.SpaceGroup method)
GetExtension() (pyobjcryst.spacegroup.SpaceGroup method)
GetFormalCharge() (pyobjcryst.scatteringpower.ScatteringPower method)
GetFormula() (pyobjcryst.molecule.Molecule method)
GetForwardScatteringFactor() (pyobjcryst.scatteringpower.ScatteringPower method)
GetGeneGroup() (pyobjcryst.refinableobj.RefinableObj method)
GetInversionCenter() (pyobjcryst.spacegroup.SpaceGroup method)
GetLastChangeClock() (pyobjcryst.scatteringpower.ScatteringPower method)
GetLatticePar() (pyobjcryst.unitcell.UnitCell method)
GetLength() (pyobjcryst.molecule.MolBond method)
GetLength0() (pyobjcryst.molecule.MolBond method)
GetLengthDelta() (pyobjcryst.molecule.MolBond method)
GetLengthSigma() (pyobjcryst.molecule.MolBond method)
GetLogLikelihood() (pyobjcryst.molecule.MolBond method)
(pyobjcryst.molecule.MolBondAngle method)
(pyobjcryst.molecule.MolDihedralAngle method)
(pyobjcryst.refinableobj.RefinableObj method)
(pyobjcryst.refinableobj.Restraint method)
GetLSQCalc() (pyobjcryst.refinableobj.RefinableObj method)
GetLSQDeriv() (pyobjcryst.refinableobj.RefinableObj method)
GetLSQObs() (pyobjcryst.refinableobj.RefinableObj method)
GetLSQWeight() (pyobjcryst.refinableobj.RefinableObj method)
GetMass() (pyobjcryst.atom.Atom method)
GetMasterClockScatteringPower() (pyobjcryst.crystal.Crystal method)
GetMaximumLikelihoodNbGhostAtom() (pyobjcryst.scatteringpower.ScatteringPower method)
GetMaximumLikelihoodParClock() (pyobjcryst.scatteringpower.ScatteringPower method)
GetMaximumLikelihoodPositionError() (pyobjcryst.scatteringpower.ScatteringPower method)
GetMinDistanceTable() (pyobjcryst.crystal.Crystal method)
GetMolecule() (pyobjcryst.molecule.MolAtom method)
(pyobjcryst.molecule.MolBond method)
(pyobjcryst.molecule.MolBondAngle method)
(pyobjcryst.molecule.MolDihedralAngle method)
GetName() (pyobjcryst.io.XMLCrystTag method)
(pyobjcryst.molecule.MolAtom method)
(pyobjcryst.molecule.MolBond method)
(pyobjcryst.molecule.MolBondAngle method)
(pyobjcryst.molecule.MolDihedralAngle method)
(pyobjcryst.molecule.RigidGroup method)
(pyobjcryst.refinableobj.RefObjOpt method)
(pyobjcryst.refinableobj.RefParType method)
(pyobjcryst.refinableobj.RefinableObj method)
(pyobjcryst.refinableobj.RefinableObjRegistry method)
(pyobjcryst.refinableobj.ScattererRegistry method)
(pyobjcryst.refinableobj.ScatteringPowerRegistry method)
(pyobjcryst.refinableobj.ZAtomRegistry method)
(pyobjcryst.spacegroup.SpaceGroup method)
(pyobjcryst.zscatterer.ZAtom method)
GetNb() (pyobjcryst.refinableobj.RefinableObjRegistry method)
(pyobjcryst.refinableobj.ScattererRegistry method)
(pyobjcryst.refinableobj.ScatteringPowerRegistry method)
(pyobjcryst.refinableobj.ZAtomRegistry method)
GetNbAtoms() (pyobjcryst.molecule.Molecule method)
GetNbAttribute() (pyobjcryst.io.XMLCrystTag method)
GetNbBondAngles() (pyobjcryst.molecule.Molecule method)
GetNbBonds() (pyobjcryst.molecule.Molecule method)
GetNbChoice() (pyobjcryst.refinableobj.RefObjOpt method)
GetNbComponent() (pyobjcryst.scatterer.Scatterer method)
(pyobjcryst.scatteringpower.ScatteringComponentList method)
GetNbDihedralAngles() (pyobjcryst.molecule.Molecule method)
GetNbLSQFunction() (pyobjcryst.refinableobj.RefinableObj method)
GetNbOption() (pyobjcryst.refinableobj.RefinableObj method)
GetNbPar() (pyobjcryst.refinableobj.RefinableObj method)
GetNbParNotFixed() (pyobjcryst.refinableobj.RefinableObj method)
GetNbRigidGroups() (pyobjcryst.molecule.Molecule method)
GetNbScatterer() (pyobjcryst.crystal.Crystal method)
GetNbScatteringPower() (pyobjcryst.scatteringpower.ScatteringPower method)
GetNbSymmetrics() (pyobjcryst.spacegroup.SpaceGroup method)
GetNbTranslationVectors() (pyobjcryst.spacegroup.SpaceGroup method)
GetNorm() (pyobjcryst.molecule.Quaternion method)
GetObj() (pyobjcryst.refinableobj.RefinableObjRegistry method)
(pyobjcryst.refinableobj.ScattererRegistry method)
(pyobjcryst.refinableobj.ScatteringPowerRegistry method)
(pyobjcryst.refinableobj.ZAtomRegistry method)
GetOccupancy() (pyobjcryst.molecule.MolAtom method)
(pyobjcryst.scatterer.Scatterer method)
(pyobjcryst.zscatterer.ZAtom method)
GetOption() (pyobjcryst.refinableobj.RefinableObj method)
GetOrthMatrix() (pyobjcryst.unitcell.UnitCell method)
GetOrthonormalCoords() (pyobjcryst.unitcell.UnitCell method)
GetPar() (pyobjcryst.refinableobj.RefinableObj method)
GetParamSet() (pyobjcryst.refinableobj.RefinableObj method)
GetParamSet_ParNotFixedHumanValue() (pyobjcryst.refinableobj.RefinableObj method)
GetParamSetName() (pyobjcryst.refinableobj.RefinableObj method)
GetParNotFixed() (pyobjcryst.refinableobj.RefinableObj method)
GetPhi() (pyobjcryst.zscatterer.ZScatterer method)
GetPsi() (pyobjcryst.zscatterer.ZScatterer method)
GetRadius() (pyobjcryst.atom.Atom method)
(pyobjcryst.scatteringpower.ScatteringPower method)
(pyobjcryst.scatteringpowersphere.ScatteringPowerSphere method)
(pyobjcryst.zscatterer.GlobalScatteringPower method)
GetRefParListClock() (pyobjcryst.refinableobj.RefinableObj method)
GetRegistryClock() (pyobjcryst.refinableobj.RefinableObjRegistry method)
(pyobjcryst.refinableobj.ScattererRegistry method)
(pyobjcryst.refinableobj.ScatteringPowerRegistry method)
(pyobjcryst.refinableobj.ZAtomRegistry method)
GetResonantScattFactImag() (pyobjcryst.scatteringpower.ScatteringPower method)
GetResonantScattFactReal() (pyobjcryst.scatteringpower.ScatteringPower method)
GetRestraintCost() (pyobjcryst.refinableobj.RefinableObj method)
GetRigidGroupClock() (pyobjcryst.molecule.Molecule method)
GetRigidGroupList() (pyobjcryst.molecule.Molecule method)
GetScatt() (pyobjcryst.crystal.Crystal method)
GetScatterer() (pyobjcryst.crystal.Crystal method)
GetScattererRegistry() (pyobjcryst.crystal.Crystal method)
GetScatteringComponentList() (pyobjcryst.crystal.Crystal method)
(pyobjcryst.scatterer.Scatterer method)
GetScatteringFactor() (pyobjcryst.scatteringpower.ScatteringPower method)
GetScatteringPower() (pyobjcryst.atom.Atom method)
(pyobjcryst.crystal.Crystal method)
(pyobjcryst.molecule.MolAtom method)
(pyobjcryst.zscatterer.ZAtom method)
GetScatteringPowerRegistry() (pyobjcryst.crystal.Crystal method)
GetSpaceGroup() (pyobjcryst.unitcell.UnitCell method)
GetSpaceGroupNumber() (pyobjcryst.spacegroup.SpaceGroup method)
GetStretchModeBondAngleList() (pyobjcryst.molecule.Molecule method)
GetStretchModeBondLengthList() (pyobjcryst.molecule.Molecule method)
GetStretchModeTorsionList() (pyobjcryst.molecule.Molecule method)
GetSubObjRegistry() (pyobjcryst.refinableobj.RefinableObj method)
GetSymbol() (pyobjcryst.scatteringpower.ScatteringPower method)
GetSymmetryOperations() (pyobjcryst.spacegroup.SpaceGroup method)
GetTemperatureFactor() (pyobjcryst.scatteringpower.ScatteringPower method)
GetTranslationVectors() (pyobjcryst.spacegroup.SpaceGroup method)
GetType() (pyobjcryst.refinableobj.Restraint method)
GetUniqueAxis() (pyobjcryst.spacegroup.SpaceGroup method)
GetUseDynPopCorr() (pyobjcryst.crystal.Crystal method)
GetVolume() (pyobjcryst.unitcell.UnitCell method)
GetX() (pyobjcryst.molecule.MolAtom method)
(pyobjcryst.scatterer.Scatterer method)
GetXCoord() (pyobjcryst.zscatterer.ZScatterer method)
GetY() (pyobjcryst.molecule.MolAtom method)
(pyobjcryst.scatterer.Scatterer method)
GetYCoord() (pyobjcryst.zscatterer.ZScatterer method)
GetZ() (pyobjcryst.molecule.MolAtom method)
(pyobjcryst.scatterer.Scatterer method)
GetZAngle() (pyobjcryst.zscatterer.ZAtom method)
(pyobjcryst.zscatterer.ZScatterer method)
GetZAngleAtom() (pyobjcryst.zscatterer.ZAtom method)
(pyobjcryst.zscatterer.ZScatterer method)
GetZAtomRegistry() (pyobjcryst.zscatterer.ZScatterer method)
GetZAtomX() (pyobjcryst.zscatterer.ZScatterer method)
GetZAtomY() (pyobjcryst.zscatterer.ZScatterer method)
GetZAtomZ() (pyobjcryst.zscatterer.ZScatterer method)
GetZBondAtom() (pyobjcryst.zscatterer.ZAtom method)
(pyobjcryst.zscatterer.ZScatterer method)
GetZBondLength() (pyobjcryst.zscatterer.ZAtom method)
(pyobjcryst.zscatterer.ZScatterer method)
GetZCoord() (pyobjcryst.zscatterer.ZScatterer method)
GetZDihedralAngle() (pyobjcryst.zscatterer.ZAtom method)
(pyobjcryst.zscatterer.ZScatterer method)
GetZDihedralAngleAtom() (pyobjcryst.zscatterer.ZAtom method)
(pyobjcryst.zscatterer.ZScatterer method)
GetZScatterer() (pyobjcryst.zscatterer.ZAtom method)
GlobalOptRandomMove() (pyobjcryst.refinableobj.RefinableObj method)
GlobalScatteringPower (class in pyobjcryst.zscatterer)
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